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Yayın EEG signal compression based on classified signature and envelope vector sets(Wiley, 2009-03) Gürkan, Hakan; Güz, Ümit; Yarman, Bekir Sıddık BinboğaIn this paper, a novel method to compress electroencephalogram (EEG) signal is proposed. The proposed method is based on the generation process of the classified signature and envelope vector sets (CSEVS), which employs an effective k-means clustering algorithm. It is assumed that both the transmitter and the receiver units have the same CSEVS. In this work, on a frame basis, EEG signals are modeled by multiplying only three factors called as classified signature vector, classified envelope vector, and gain coefficient (GC), respectively. In other words, every frame of an EEG signal is represented by two indices R and K of CSEVS and the GC. EEG signals are reconstructed frame by frame using these numbers in the receiver unit by employing the CSEVS. The proposed method is evaluated by using some evaluation metrics that are commonly used in this area such as root-mean-square error, percentage root-mean-square difference, and measuring with visual inspection. The performance of the proposed method is also compared with the other methods. It is observed that the proposed method achieves high compression ratios with low-level reconstruction error while preserving diagnostic information in the reconstructed EEG signal.Yayın Behavior of quantum fisher information of bell pairs under decoherence channels(Polish Acad Sciences Inst Physics, 2014-02) Özaydın, Fatih; Altıntaş, Azmi Ali; Buğu, Sinan; Yeşilyurt, CanQuantum Fisher information has recently been an essential tool for analyzing the phase sensitivity of the quantum states in various quantum tasks, requiring high precision, such as quantum clock synchronization, positioning and many applications which include quantum interferometers. Due to the interactions with the environment, all quantum systems are subject to various decoherence effects. Therefore the research on quantum Fisher information under decoherence has been recently attracting more attention. In this work, analyzing the quantum Fisher information, we study the phase sensitivity of bipartite quantum correlations, in particular four Bell pairs amplitude damping channels. For a specific Bell state we arrive at similar results of Greenberger-Horne-Zeilinger (GHZ) states (as expected). For the other three Bell states, we present our results which point the interesting behavior of quantum Fisher information with respect to the decoherence rate. We also find the regions where the quantum Fisher information exhibits discontinuities.Yayın Design of a new low loss fully CMOS tunable floating active inductor(Springer New York LLC, 2016-12) Momen, Hadi Ghasemzadeh; Yazgı, Metin; Köprü, Ramazan; Saatlo, Ali NaderiIn this paper, a new tunable floating active inductor based on a modified tunable grounded active inductor is proposed. The multi regulated cascade stage is used in the proposed active structure to decrease the parasitic series resistance of active inductor, thus the Q factor enhancement is obtained. Furthermore, the arrangement of this stage leads to the smaller input transistor which determines active inductor’s self-resonance frequency and to be free of body effect which is crucial in sub-micron technology. Symmetrical design strategy has enabled both ports of the proposed floating active inductor to demonstrate the same properties. The Q factor and active inductor value are tuned with bias current and flexible capacitance (varactor), respectively. The self-resonance frequency of floating active inductor (~6.2 GHz) is almost the same as grounded prototype. In addition, the proposed active inductor also shows higher quality factor and inductance value compared to the conventional floating active inductor circuits. To show the performance of suggested circuit, simulations are done by using a 0.18 µm CMOS process, which demonstrates an adjustable quality factor of 10–567 with an inductance value range of 6–284 nH. Total DC power consumption and occupied area are 2 mW and 934.4 µm2, respectively.Yayın Discovering cis-regulatory modules by optimizing barbecues(Elsevier Science Bv, 2009-05-28) Mosig, Axel; Bıyıkoğlu, Türker; Prohaska, Sonja J.; Stadler, Peter F.Gene expression in eukaryotic cells is regulated by a complex network of interactions, in which transcription factors and their binding sites on the genomic DNA play a determining role. As transcription factors rarely, if ever, act in isolation, binding sites of interacting factors are typically arranged in close proximity forming so-called cis-regulatory modules. Even when the individual binding sites are known, module discovery remains a hard combinatorial problem, which we formalize here as the Best Barbecue Problem. It asks for simultaneously stabbing a maximum number of differently colored intervals from K arrangements of colored intervals. This geometric problem turns out to be an elementary, yet previously unstudied combinatorial optimization problem of detecting common edges in a family of hypergraphs, a decision version of which we show here to be NP-complete. Due to its relevance in biological applications, we propose algorithmic variations that are suitable for the analysis of real data sets comprising either many sequences or many binding sites. Being based on set systems induced by interval arrangements, our problem setting generalizes to discovering patterns of co-localized itemsets in non-sequential objects that consist of corresponding arrangements or induce set systems of co-localized items. In fact, our optimization problem is a generalization of the popular concept of frequent itemset mining.Yayın A design technique of 50 Ω terminated bandpass matching network and its implementation to a Y-shaped monopole antenna matching(Springer, 2016-12) Aydın, Çağatay; Atilla, Doğu Çağdaş; Köprü, Ramazan; Kılınç, Sedat; Karakuş, Cahit; Yarman, Bekir Sıddık BinboğaIn this paper, a 50 Ω terminated or in other words transformerless bandpass matching network design methodology and an implementation example are presented. The real frequency techniques are powerful numerical methods to design wideband lossless two-port networks such as filters, matching networks and amplifiers. In these techniques, the value of the termination resistance of the designed network could not be yielded as 50 Ω by numerical package. Hence, a transformer is also required for 50 Ω termination which is not practical for high frequency applications. By employing the proposed procedure, it is guaranteed to obtain transformerless bandpass matching network. Also in this study a wideband suspended monopole antenna is examined. The proposed antenna consists of two major elements; Y-shaped impedance matching plate and hemi-circular radiator. Moreover Y-shaped impedance matching plate connected to a feeding probe excites the suspended hemi-circular radiator via air gap. Consequently, a transformerless bandpass matching network is designed to filter and expand the operational frequency bandwidth of the proposed antenna. It has been observed that ideal circuit and the layout of the matching network simulation have good agreement.Yayın Signals of chaotic behavior in PMMA(Pergamon-Elsevier Science, 2003-07) Hacınlıyan, Avadis Simon; Skarlatos, Yani; Şahin, Gökhan; Akın, Güzin GülsünThe time evolution of the current passing through PMMA polymer thin films under 10 V at 23degreesC (296 K) was sampled at intervals ranging from 1 to 20 s. The data showed chaotic behavior in the context of pinned charge density waves [Phys. Rev. B 41 (1990) 11522]. The resultant time series has been analyzed by means of TISEAN, time series analysis software [The TISEAN package CHAOS 9 (1999) 413]. The analysis has revealed a positive maximal Lyapunov exponent. This is also corroborated by a calculation of the fractal dimension and application of the Kaplan-Yorke conjecture. In the analysis two widely separated time scales have been observed; the first zero crossing of the correlation function at 8380 s and the first marked minimum of the average mutual information at 40 s.Yayın Metamutator applications: a quadrature MOS only oscillator and transconductance/transimpedance amplifiers(Springer New York LLC, 2016-06-18) Göknar, İzzet Cem; Yıldız, Merih; Minaei, ShahramNMOS based circuit realizations of a sinusoidal quadrature oscillator, a transconductance, a transimpedance amplifier are presented. All the circuits are constructed with a voltage-mode “Metamutator” consisting of an analog adder and a subtractor which is one of its possible realizations. The most important feature of the proposed circuits is their extremely simple structures containing only twelve NMOS transistors (six for adder, six for subtractor). Another significant advantage of the proposed circuits is that no external passive element is needed for the oscillator and only one resistor is used for each amplifier circuit; a variable resistor can provide gain adjustability. The post-layout simulations of all the proposed circuits have been executed using TSMC 0.25 µm process parameters with ±1.25 V power supply voltage.Yayın A parallel implementation: Real space Green's function technique(Sage Publications, 2007-04) Onat, Berk; Durukanoğlu, Sondan; Dağ, HasanWe develop an MPI-based parallel algorithm to implement the real space Green's function technique for calculating the vibrational density of states corresponding to a solid. The Hamiltonian describing the interactions between the atoms within the system is obtained from the embedded atom method. The parallel implementation speeds up calculation by an order of magnitude. The parallel implementation details and results are presented in this paper.Yayın Decomposition of the nodal conductance matrix of a planar resistive grid and derivation of its eigenvalues and eigenvectors using the kronecker product and sum with application to cnn image filters(IEEE, 2016-12) Tavşanoğlu, Ahmet VedatIt is shown that an (M× N)-node planar resistive grid can be decomposed into two sub-grids; one made up of M N-node horizontal and the other of N M-node vertical linear resistive grids which corresponds to decomposing its nodal conductance matrix (NCM) into the Kronecker sum of the NCMs of horizontal and vertical linear grids. This enables the analytical expressions of the eigenvalues and eigenvectors of the NCMs of the sub-grids as well as those of the planar resistive grid to be expressed in terms of those of the two linear grids, whose analytical expressions are well known. For a Cellular Neural Network (CNN) Gabor-type filter (GTF) we define generalized nodal conductance matrices (GNCMs) that correspond to the NCMs of the resistive sub-grids, show that each Kronecker decomposition has a counterpart in CNN GTF and prove that each GNCM, its counterpart NCM and the corresponding temporal state matrices are related through unitary diagonal similarity transformations. Consequently, we prove that the eigenvalues of the temporal state matrix of a spatial band-pass CNN GTF are the same as those of its counterpart spatial low-pass CNN image filter, hence their temporal transient behaviors are similar in settling to a forced response.Yayın Achieving the capacity region boundary of fading CDMA channels via generalized iterative waterfilling(IEEE, 2006-11) Kaya, Onur; Ulukuş, ŞennurWe characterize the optimum power control policies that achieve arbitrary rate tuples on the boundary of the, capacity region of a power controlled, code division multiple access (CDMA) system in a fading channel with perfect channel state information (CSI). We propose a "generalized" waterfilling approach, and provide an iterative algorithm that solves for the optimum power allocation policy, for A given arbitrary rate tuple on the boundary of the capacity region. We then investigate the effects of limited feedback on the capacity region, and demonstrate that a good power control policy may require only a very low rate feedback.
