ISSR genotyping of Phoenix theophrasti natural populations in Turkey and Crete (Greece) and P. Dactylifera

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dc.authorid0000-0001-6287-5038
dc.authorid0000-0001-9892-8429
dc.authorid0000-0002-7011-8640
dc.authorid0000-0001-8748-8093
dc.authorid0000-0003-0926-8671
dc.authorid0000-0002-9910-850X
dc.authorid0000-0002-8223-0971
dc.authorid0000-0002-4499-8912
dc.contributor.authorBoydak, Melihen_US
dc.contributor.authorTeker, Tuğbaen_US
dc.contributor.authorGazdağlı, Aylinen_US
dc.contributor.authorThanos, Costas A.en_US
dc.contributor.authorÇalışkan, Serveten_US
dc.contributor.authorKaltsis, Apostolisen_US
dc.contributor.authorÇalikoğlu Tozlu, Emineen_US
dc.contributor.authorFournaraki, Christinien_US
dc.contributor.authorAlbayrak, Gülruhen_US
dc.date.accessioned2021-11-09T16:54:52Z
dc.date.available2021-11-09T16:54:52Z
dc.date.issued2021-10
dc.departmentIşık Üniversitesi, Güzel Sanatlar Fakültesi, Peyzaj Mimarlığı Bölümüen_US
dc.departmentIşık University, Faculty of Fine Arts, Department of Landscape Architectureen_US
dc.descriptionThis work was supported by the Scientific Research Projects Coordination Unit of Isik University, Project No. 16A401.en_US
dc.description.abstractIntraspecific and interspecific diversity between Phoenix theophrasti individuals (92 from Turkey and 70 from Crete, Greece) and P. dactylifera specimens (28 from Turkey) were investigated by inter-simple sequence repeat (ISSR) analysis. A total of 45 polymorphic fragments, 360–3454 bps long, were produced. Intraspecific diversity for P. dactylifera was 26.63% and similarities ranged between 0.5 and 1. In the constructed dendrogram, P. dactylifera specimens clustered together in the first main group, outside branches consisting of P. theophrasti samples that generated the second main group. The intraspecific diversity for Turkish P. theophrasti populations was found to be 18.60% and for Cretan populations 13.45%. Antalya–Kumluca–Karaöz samples were grouped outside the branches of the remaining P. theophrasti samples. All three Cretan populations formed their own, separate branch. Datça–Eksera Stream samples together with two Datça–Hurmalıbük specimens constituted a group excluding Datça–Hurmalıbük and Bodrum–Gölköy specimens. Five Bodrum–Gölköy genotypes were clustered separately. Gene flow (Nm) values among populations were estimated from 0.157 to 59.615. AMOVA analysis revealed the percentages of variance among and within Phoenix populations: 73% and 27%, respectively. The first three principal coordinate components accounted for 37.60, 29.32 and 20.04%, respectively, thus the total variance obtained from the first three principal coordinate components was 86.96%. A positive correlation between geographic and genetic distances of populations was detected by Mantel tests (Rx,y = 0.44, p = 0.04). The populations were classified into four clusters by STRUCTURE analysis, supported the PCoA data. To conclude, ISSR results support that P. dactylifera and P. theophrasti are different species. Moreover, the findings not only revealed relationships between natural Phoenix theophrasti populations but also supported the identification of the P. theophrasti individuals that are phenotypically differentiated in the divided Bodrum–Gölköy population (P. theophrasti subsp. golkoyana).en_US
dc.description.versionPublisher's Versionen_US
dc.identifier.citationBoydak, M., Teker, T., Gazdağlı, A., Thanos, C. A., Çalışkan, S., Kaltsis, A., Çalikoğlu Tozlu, E., Fournaraki, C. & Albayrak, G. (2021). ISSR genotyping of Phoenix theophrasti natural populations in Turkey and Crete (Greece) and P. Dactylifera. Nordic Journal of Botany, 39(10), 1-11. doi:10.1111/njb.03104en_US
dc.identifier.doi10.1111/njb.03104
dc.identifier.endpage11
dc.identifier.issn0107-055X
dc.identifier.issn1756-1051
dc.identifier.issue10
dc.identifier.scopus2-s2.0-85116352097
dc.identifier.scopusqualityQ3
dc.identifier.startpage1
dc.identifier.urihttps://hdl.handle.net/11729/3283
dc.identifier.urihttp://dx.doi.org/10.1111/njb.03104
dc.identifier.volume39
dc.identifier.wosWOS:000702312000001
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.indekslendigikaynakScience Citation Index Expanded (SCI-EXPANDED)en_US
dc.institutionauthorBoydak, Melihen_US
dc.institutionauthorid0000-0001-6287-5038
dc.language.isoenen_US
dc.peerreviewedYesen_US
dc.publicationstatusPublisheden_US
dc.publisherJohn Wiley and Sons Incen_US
dc.relation.ispartofNordic Journal of Botanyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectAnalysis of molecular variance (AMOVA)en_US
dc.subjectGenetic diversityen_US
dc.subjectGenetic variationen_US
dc.subjectGermplasmen_US
dc.subjectInter-simple sequence repeat (ISSR) analysisen_US
dc.subjectL.en_US
dc.subjectMarkersen_US
dc.subjectPalmsen_US
dc.subjectPhoenix dactyliferaen_US
dc.subjectPhoenix theophrastien_US
dc.subjectPolymeraseen_US
dc.subjectPrincipal coordinate analysis (PCoA)en_US
dc.subjectSoftwareen_US
dc.titleISSR genotyping of Phoenix theophrasti natural populations in Turkey and Crete (Greece) and P. Dactyliferaen_US
dc.typeArticleen_US
dspace.entity.typePublication

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